Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAELLTLARPYAKAAFAYASEQGATDNWSNALQVLSAA------VQDEAFSAYLNRPEHTPAEQVKLFAKVLGEDQSQAVSNFLTLLADNDRLVLLPEIAAEYEQLKSQNNNNVDVVIESAFPLTAEQEQLLKSALEKRFNSTVTVSVEVKPELIAGVVIRAGDQVIDDSALNKLEKMRTRLLA
5DN6 Chain:H ((13-115))------IAGRYAQALFDLVRDSGGIDALSSQIDDLASAYDASQDLRDLTLSPLYDRQQQEAA--VGALSERMG--LSAELANTLRLLARNRRLFTLPQFVAKLRNLIADAKGE-----------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5DN6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain H - contact count / total energy / energy per contact / energy per residue : 347 -7911 -22.80 -81.56
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain H : 0.68

3D Compatibility (PKB) : -22.80
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.568

(partial model without unconserved sides chains):
PDB file : Tito_5DN6.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5DN6-query.scw
PDB file : Tito_Scwrl_5DN6.pdb: