Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMENFEVIKALFLGFVEGLTEFLPISSTGHLILFGHIIDFHSDGGRVFEVVIQLGAILAVCWLYRQKIINLIKGFFS-GDVESRHFAISVLIAFFPAVIIGVLAVDFIKSVLFSPIVVAIALIVGALIIFWVESKQFEHKTDDATKITFKQALLVGLAQCVAMIPGTSRSGATIVGGMFAGLSRKAATEFSFFLAMPTMLGAATFDLIKNADVLTSDNMVNIGVGFVAAFIAALLVVKALVLFVERHTLRVFAWYRIVLGVIILIAAMFFNLSA
3DKN Chain:B ((12-54))-------------------------------------------------------------EFIEECRRVWLVLKKPTKDEYLAVAKVTALGISLLGIIGYIIH-------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3DKN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 13 -656 -50.42 -15.61
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain B : 0.40

3D Compatibility (PKB) : -50.42
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.40
QMean score : 0.374

(partial model without unconserved sides chains):
PDB file : Tito_3DKN.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3DKN-query.scw
PDB file : Tito_Scwrl_3DKN.pdb: