Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSENIQLPNQVFPTTHGEVNLAEVDNEWLIIYFYPKDSTPGCTTQAVGFSCLKDQFDALGARIFGVSRDSVKAHQNFTEKQALTIDLISDKEEVLCKHFDVIKEKNMYGKKVMGIERSTFIFHNKT-LVKSYRKVKAAGHAEQVLEDLKALQTA
5IM9 Chain:A ((32-156))-------------------------GHWLVIYFYPKDSTPGCTTEGLDFNALLPEFDKAGAKILGVSRDSVKSHDNFCAKQGFAFPLVSDGDEALCRAFDVIKEKNMYGKQVLGIERSTFLLSPEGQVVQAWRKVKVAGHADAVLAALKA----


General information:
TITO was launched using:
RESULT:

Template: 5IM9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 543 -46973 -86.51 -378.81
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain A : 0.85

3D Compatibility (PKB) : -86.51
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.85
QMean score : 0.487

(partial model without unconserved sides chains):
PDB file : Tito_5IM9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5IM9-query.scw
PDB file : Tito_Scwrl_5IM9.pdb: