Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPISNQDLRKAGLKVTLPRIKILELLENSKQHHLSAEDIYKTLLEQGEDVGLATVYRVLTQFEAAGIIQRHHFENNHSVFEIMQEDHHDHLVCQNCNKVIEFTNDVIEKEQHSVAEQHGFTLTGHSLNLYGYCNEPECQEALRKK
5FD5 Chain:A ((15-133))-----------GMRMTEQRRVIARILEDSEDHP-DVEELYRRSVKVDAKISISTVYRTVKLFEDAGIIARHDFRDGRSRYETVPEEHHDHLIDLKTGTVIEFRSPEIEALQERIAREHGFRLVDHRLELYG--------------


General information:
TITO was launched using:
RESULT:

Template: 5FD5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 353 -44461 -125.95 -373.62
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain A : 0.78

3D Compatibility (PKB) : -125.95
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.542

(partial model without unconserved sides chains):
PDB file : Tito_5FD5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5FD5-query.scw
PDB file : Tito_Scwrl_5FD5.pdb: