Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQSLMQAPLLIALGLLLAAPAQAHLKKPSQLSSFSWDNCDEGKDPAVIRSLTLEPDPIIVPGNVTLSVMGSTSVPLSSPLKVDLVLEKEVAGLWIKIPCTDYIGSCTFEHFCDVLDMLIPTGEPCPEPLRTYGLPCHCPFKEGTYSLPKSEFVVPDLELPSWLTTGNYRIESVLSSSGKRLGCIKIAASLKGI
2AGC Chain:A ((3-161))---------------------------------FSWDNCDEGKDPAVIKSLTIQPDPIVVPGDVVVSLEGKTSVPLTAPQKVELTVEKEVAGFWVKIPCVEQLGSCSYENICDLIDEYIPPGESCPEPLHTYGLPCHCPFKEGTYSLPTSNFTVPDLELPSWLSTGNYRIQSILSSGGKRLGCIKIAASLKG-


General information:
TITO was launched using:
RESULT:

Template: 2AGC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 653 -65806 -100.77 -413.87
target 2D structure prediction score : 0.53
Monomeric hydrophicity matching model chain A : 0.86

3D Compatibility (PKB) : -100.77
2D Compatibility (Sec. Struct. Predict.) : 0.53
1D Compatibility (Hydrophobicity) : 0.86
QMean score : 0.544

(partial model without unconserved sides chains):
PDB file : Tito_2AGC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2AGC-query.scw
PDB file : Tito_Scwrl_2AGC.pdb: