Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceFHFREEVNEKLRDTADGTFLVRDASTKMHGDYTLTLRKGGNNKLIKIFHRDGKYGFSDPLTFSSVVELINHY
2PNB Chain:A ((29-97))---REEVNEKLRDTADGTFLVRDASTKMHGDYTLTLRKGGNNKLIKIFHRDGKYGFSDPLTFNSVVELINHY


General information:
TITO was launched using:
RESULT:

Template: 2PNB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 210 -10380 -49.43 -150.43
target 2D structure prediction score : 0.81
Monomeric hydrophicity matching model chain A : 0.97

3D Compatibility (PKB) : -49.43
2D Compatibility (Sec. Struct. Predict.) : 0.81
1D Compatibility (Hydrophobicity) : 0.97
QMean score : 0.635

(partial model without unconserved sides chains):
PDB file : Tito_2PNB.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2PNB-query.scw
PDB file : Tito_Scwrl_2PNB.pdb: