Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFVWYNLFLKKEREVISMRKWTKGFLIFGVVTTVIGFILLFVGIQSDGIKSLLSMSKEPVYDSRTEKLTFGKEVENLEITLHQHTLTITDSF-DDQIHISYHPSLSAHHDLITNQNDRTLSLTDKKLSETPFLSSGIGGILHIASSYSSRFEEVILRLPKGRTLKGINISANRGQTTII-NASLENATLNTN-SYILRIEG-SRIKNSKLT--TPNIVNIFDTVLTDSQLES-TENHFHAE-NIQVHGKVELTA-K-DYLRIILDQKESQRINWDIS-SNYGSIFQFTREKPESRGTELSNPYKTEKTDVKDQLIARSDDNIDLISTPSRR
4OPW Chain:B ((12-205))---------------------------------------------------------------STKKITI-DDFNAIKFDG-VIDFNYEQSESTPHIEITVD--ENLHPYVNIDIQDRVLTVGFKGAK---V-D-------------HFTKFIVKTNSK---WLKEVKAS-GNANFIANSPLKGDELKINANSNCLVQLKQKVEVGKLDLNVSGSANMVVNELKTDKLECSINGSGTINLKAGN--AEEADYSITTDGEIMAFGVAV--P--EVNCKITGKGSAQIHP-------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4OPW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1056 65341 61.88 357.05
target 2D structure prediction score : 0.46
Monomeric hydrophicity matching model chain B : 0.58

3D Compatibility (PKB) : 61.88
2D Compatibility (Sec. Struct. Predict.) : 0.46
1D Compatibility (Hydrophobicity) : 0.58
QMean score : 0.199

(partial model without unconserved sides chains):
PDB file : Tito_4OPW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4OPW-query.scw
PDB file : Tito_Scwrl_4OPW.pdb: