Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKMKYYEETSALLHEFSEENQKYFEELWESFNLAGFLYDEDYLREQIYLMMLDFSEAERDGMSAEDYLGKNPKKIMKEILKGAPRSSIKESLLTPILVLAVLRYYQLLGDFSKGPLLTVNLLTFLGQLLIFLIGFGLVATILRRSLVQDSPKMKIGTYIVVGTIVLLVVLGYVGMASFIQEGAFYIPAPWDSLSVFTISLVIGIWNWKEAVFRPFVSMIIAHLVVGSLLRYYEWMGISNVFLTKVIPLAVLFIGIFLLFRGFKKIKWSEVQSKSRCKAVFCYNEGKNVRN
2O4T Chain:A ((3-81))---------HVSRVEKLPKDYQIVYKEIQKYLFKVGP-VELNEGIGLLSEILGFFEEGAAAGKGVLDVTGTDVAAFCDALIGD-SKT-YAD--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2O4T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 232 -33199 -143.10 -420.23
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.43

3D Compatibility (PKB) : -143.10
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.43
QMean score : 0.724

(partial model without unconserved sides chains):
PDB file : Tito_2O4T.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2O4T-query.scw
PDB file : Tito_Scwrl_2O4T.pdb: