Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEFEEKTLSRKEIYQGPIFKLVQDQVELPEGKGTARRDLIFHNGAVCVLAVTDEQKLILVKQYRKAIEAVSYEIPAGKLEVGENTAPVAAALRELEEETAY-TGKLELLYDFYSAIGFCNEKLKLYLASDLTKVENPRPQDEDETLEVLEVSLEEAKELIQSGHICDAKTIMAVQYWELQKK
5I8U Chain:G ((5-173))---DFETISSETLHTGAIFALRRDQVRMP-GGGIVTREVVEHFGAVAIVAMDDNGNIPMVYQYRHTYGRRLWELPAGLLDVA-GEPPHLTAARELREEVGLQASTWQVLVDLDTAPGFSDESVRVYLATGLREVGRP-----QADMTMGWYPIAEAARRVLRGEIVNSIAIAGV--------


General information:
TITO was launched using:
RESULT:

Template: 5I8U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain G - contact count / total energy / energy per contact / energy per residue : 698 -51982 -74.47 -318.91
target 2D structure prediction score : 0.39
Monomeric hydrophicity matching model chain G : 0.80

3D Compatibility (PKB) : -74.47
2D Compatibility (Sec. Struct. Predict.) : 0.39
1D Compatibility (Hydrophobicity) : 0.80
QMean score : 0.327

(partial model without unconserved sides chains):
PDB file : Tito_5I8U.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5I8U-query.scw
PDB file : Tito_Scwrl_5I8U.pdb: