Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMWVKDMFILGSGDQGLAVLSIYEGEVEGLV--DIFEEGRFIGCKILDKTVLGGLKWFESLLLTLDRKPRAIVAFGDNFKREEIFCS-YKNKVEYINVICNSARIFKHSFLGK--GNFIGTNVTIQALVEIGDNNIINSGSIVSCNCKIGNNVNISPGVILSGNVKIDDNVFIGAGATIRDAVSIGFGAIIGAGATVIHNVPENAVVVGTPGKIIKYRSV
5T2Y Chain:A ((5-196))-------------ARTEKIYIYGASGHGLVCEDVAKNMGYKECIFLDD--F--MK-FESTLPKYD----FFIAIGNNEIRKKIYQKISENGFKIVNLIHKSALISPSAIVEENAGILIMPYVVINAKAKIEKGVILNTSSVIEHECVIGEFSHVSVGAKCAGNVKIGKNCFLGINSCVLPNLSLADDSILGGGATLVKNQDEKGVFVGVPAK-------


General information:
TITO was launched using:
RESULT:

Template: 5T2Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1115 -23323 -20.92 -126.07
target 2D structure prediction score : 0.50
Monomeric hydrophicity matching model chain A : 0.74

3D Compatibility (PKB) : -20.92
2D Compatibility (Sec. Struct. Predict.) : 0.50
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.365

(partial model without unconserved sides chains):
PDB file : Tito_5T2Y.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5T2Y-query.scw
PDB file : Tito_Scwrl_5T2Y.pdb: