Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLFSGSSMSEQIFIQGPVGKIELFVDRPEGEIKGFAVVCHPHPLQGGTPQHKVPALLTQIFNEYGCIVYRPSFRGLGGSEGVHDE--GHGETEDILAVIEHVRKLHAGLPFYAGGFSFGSHVLAKCHAQLSPELQPVQLILCGLPTATVVG--L----------------R--------H--------YKT----PEIQGDILLIHGEQDDITLLSDAIEWAKP-QKHPITILSGANHFFTGYL-KQLRQIITRFIIMK
3PFB Chain:A ((18-265))----YFQGMATITLERDGLQLVGTREEPFGEIYDMAIIFHGFTANRN---TSLLREIANSLRDENIASVRFDFNGHGDSDGKFENMTVLNEIEDANAILNYVKTDPHVRNIYLVGHAQGGVVASMLAGLYPD--LIKKVVLLAPAATLKGDALEGNTQGVTYNPDHIPDRLPFKDLTLGGFYLRIAQQLPIYEVSAQFTKPVCLIHGTDDTVVSPNASKKYDQIYQNSTLHLIEGADHCFSDSYQKNAVNLTTDFLQ--


General information:
TITO was launched using:
RESULT:

Template: 3PFB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1137 -32038 -28.18 -155.52
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : -28.18
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.518

(partial model without unconserved sides chains):
PDB file : Tito_3PFB.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3PFB-query.scw
PDB file : Tito_Scwrl_3PFB.pdb: