Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVMLSLSVFFKGLGIGSGLIVAIGAQNAFVLKQGLKQ-QYVFWLCLICALSDSILIACGVLGFAEIMTASPILITVAKYLGATFLFVYGAKAFYAAFKTNQGMELDSSQKQT-LTQALITCLAFTWLNPHVYLDTIVLIGSVATQLEDKISFALGSILASWIFFFSLGYGARFLKPLFINPKAWKILDFMIGCVMWSIAISLLI---
5JBL Chain:A ((21-191))----NEPQLLIETWGQPGEIID----GVPMLESGLKPGLYIEGIFLQAEVVNRNK---------RLYPKRILEKAVKDYINEQVLT-----------KQALGELNAPPRANVDPMQAAIIIEDMWWKGNDVYGRARVIEGD-----HGPGDKLAANIRAGWIP----GVASRGLGSLTDTNEGYRIVNEG-----FKLTVGVDAVWG


General information:
TITO was launched using:
RESULT:

Template: 5JBL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 795 -73247 -92.13 -457.79
target 2D structure prediction score : 0.36
Monomeric hydrophicity matching model chain A : 0.58

3D Compatibility (PKB) : -92.13
2D Compatibility (Sec. Struct. Predict.) : 0.36
1D Compatibility (Hydrophobicity) : 0.58
QMean score : 0.073

(partial model without unconserved sides chains):
PDB file : Tito_5JBL.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5JBL-query.scw
PDB file : Tito_Scwrl_5JBL.pdb: