Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAIERTLSIVKPDAVSKNHIGEIFARFEKAGLKIVATKMKHLSQADAEGFYAEHKERGFFGDLVAFMTSGPVVVSVLEGENAVLAHREILGATNPKEAAPGTIRADFAVSIDENAAHGSDSVASAEREIAYFFADNEICPRTR
5V6D Chain:A ((10-149))-AIERTISIIKPDAVGKNVIGKIYSRFEENGLKIVAAKMKQLTLKEAQEFYAVHKDRPFYAGLVEFMTGGPVMIQVLEGENAVLKNRELMGATNPTEAAEGTIRADFATSVSINAVHGSDSVENAALEIAYFFSQTEICPR--


General information:
TITO was launched using:
RESULT:

Template: 5V6D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 660 -57622 -87.31 -411.58
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.90

3D Compatibility (PKB) : -87.31
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.90
QMean score : 0.442

(partial model without unconserved sides chains):
PDB file : Tito_5V6D.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5V6D-query.scw
PDB file : Tito_Scwrl_5V6D.pdb: