Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMALLITSDCINCDMCLPECPNTAIFEGNKVYEIDPLRCTECVGFYDAPTCKAVCPIDCIKQDPAHIENKEQLLEKFKGLNLIGSFSS
2FDN Chain:A ((1-50))-AYVINEACISCGACEPECPVNAISSGDDRYVIDADTCIDC------GACAGVCPVD------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2FDN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 165 -42107 -255.19 -842.14
target 2D structure prediction score : 0.78
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : -255.19
2D Compatibility (Sec. Struct. Predict.) : 0.78
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.583

(partial model without unconserved sides chains):
PDB file : Tito_2FDN.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2FDN-query.scw
PDB file : Tito_Scwrl_2FDN.pdb: