Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMANKEELIEFEGVVTETLPNTMFRVRLENGHEVVAHISGKMRKHYIRILTGDSVKVEMTPYDLTKGRITYRAR
5LMP Chain:W ((2-71))-AKEKDTIRTEGVVTEALPNATFRVKLDSGPEILAYISGKMRMHYIRILPGDRVVVEITPYDPTRGRIVYR--


General information:
TITO was launched using:
RESULT:

Template: 5LMP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain W - contact count / total energy / energy per contact / energy per residue : 280 -30018 -107.21 -428.83
target 2D structure prediction score : 0.43
Monomeric hydrophicity matching model chain W : 0.88

3D Compatibility (PKB) : -107.21
2D Compatibility (Sec. Struct. Predict.) : 0.43
1D Compatibility (Hydrophobicity) : 0.88
QMean score : 0.587

(partial model without unconserved sides chains):
PDB file : Tito_5LMP.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5LMP-query.scw
PDB file : Tito_Scwrl_5LMP.pdb: