Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTKQYMTHRCLIAPPEMADDFFANTVIYLARHDEEGAQGIIINRPAGIQIKELLNDLDIDADNVNPHEVLQGGPLRPEAGFVLHTGQPTWHSSIAVGENVCITTSKDILDAIAHNEGVGRYQIALGYASWGKNQLEDEIARGDWLICDADMDLIFNLPYDDRWDAAYKKIGVDRTWLASEIGHA
5JZG Chain:B ((72-98))VTKKTVTERILVLPLEMSNTLFATTLL-------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5JZG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 25 -5305 -212.18 -196.46
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain B : 0.58

3D Compatibility (PKB) : -212.18
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.58
QMean score : 0.317

(partial model without unconserved sides chains):
PDB file : Tito_5JZG.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5JZG-query.scw
PDB file : Tito_Scwrl_5JZG.pdb: