Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGDYLMNMLANISFDAAVFTSLEVMNVGVEDGVVKFSLSVQNAEHIYIVASVKGIEKNDTFEYGEGLDYQDWKDVDYTMMTVDSSSRPHVDHFDYVDAIEGMPFALTSTQILKLNEYLEELAREEKINELRGGWWELDI
4V39 Chain:A ((301-355))----ITNIPANISFEILMMTGLLPDKVGGVASSLYFSLPKEKISHIIFTSNKKIKNKED--------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4V39.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 104 -9136 -87.84 -166.10
target 2D structure prediction score : 0.51
Monomeric hydrophicity matching model chain A : 0.60

3D Compatibility (PKB) : -87.84
2D Compatibility (Sec. Struct. Predict.) : 0.51
1D Compatibility (Hydrophobicity) : 0.60
QMean score : -0.074

(partial model without unconserved sides chains):
PDB file : Tito_4V39.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4V39-query.scw
PDB file : Tito_Scwrl_4V39.pdb: