Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMANSAQAKKRARQNVKARKHNASLRSMVRTYIKRTLSAIAGGDYAVATEAYKKAVPVIDRMADKGIIHKNKAARHKSRLNAQVKALAN
2YKR Chain:T ((2-86))--NIKSAKKRAIQSEKARKHNASRRSMMRTFIKKVYAAIEAGDKAAAQKAFNEMQPIVDRQAAKGLIHKNKAARHKANLTAQINKLA-


General information:
TITO was launched using:
RESULT:

Template: 2YKR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain T - contact count / total energy / energy per contact / energy per residue : 260 -22101 -85.00 -260.01
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain T : 0.85

3D Compatibility (PKB) : -85.00
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.85
QMean score : 0.658

(partial model without unconserved sides chains):
PDB file : Tito_2YKR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2YKR-query.scw
PDB file : Tito_Scwrl_2YKR.pdb: