Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLKAQKLTLAVLISAAIISSAQASEQSEAK-GFVEDANGSILFRTGYLTRDKKQGAKDTSSVAQSAIVSIESGFTPGIVGFGV-GVVGDGSFKIGENKNTGNQMIPKHNDGSAYDHWARGGGSVKARFSNTTVRYGTQVLDLPVLASNTGRMVPEYFTGTLLTSHEIKNLEVVAGKFTKDQMSDQINTDADASGRGLDRAIVW-GAKYKFNDNLNASYYGLDSKNALERHYANVNFKQPLANDSSLTYDFSGYHTKFDANAHTYSATGTVAPNYAADGIADEEKTNNIWAISGTYATGPHSVMLAYQQNTGNVGYDYGQNADGFQSIYLPNSYM-SDFIGNHEKSAQIQYNVDFGKLGVLPGLNWTTAFVYGWDIKVRNVTDDAQ----------------EREFFNQVKYTVQSGFAKDASLRIRNSYYRASDAYQGAYIGDTNEWRIFLDIPVKLF
3SY9 Chain:A ((7-422))------------------------------EGFIEGSSLQLLTRNYYFNHDRR-----SKEWAQGFIATFQSGYTPGVVGFGVDAYGMLGLKL--------------YESGKAPDEFSSGGAALKIRAFDTELKLGDQFLSNPVVAGGESRMLPQTFRGVSLTNNSFEDLTLTAGQVSFTKYYN------------DSHHLSWLGGTWGGIEGFTSSLYAAELQNVWKQYYADVDYTYEIDDNWSL-----------NPGAHYYK---TVDSGDSLLGRID----NNTYSLHFAVGYRQHTVTAVLQKVNGNTPFDYINQGD---SIFLDNSQQYSDFNGPNEKSWKLQYDYDFVALGV-PGLSASASYSRG-KLDLTRVDPDSPGYGGWYSADGKNAKHWERDL--DLQYVVQGGPAKDLSLRLRWATHRGTGGYS-AVDNDIDEYRVIVDYPIDVF


General information:
TITO was launched using:
RESULT:

Template: 3SY9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1904 52551 27.60 149.72
target 2D structure prediction score : 0.49
Monomeric hydrophicity matching model chain A : 0.75

3D Compatibility (PKB) : 27.60
2D Compatibility (Sec. Struct. Predict.) : 0.49
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.356

(partial model without unconserved sides chains):
PDB file : Tito_3SY9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3SY9-query.scw
PDB file : Tito_Scwrl_3SY9.pdb: