Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMELNLKEDWSKKMKTALNRTPASFPVRRMDYNFEDTPRYWCNHEPSLTHYFTGLSTLFPEGESYFVRSVRALRAKAKENEILDREIGAFIGQEAMHSKEHHAFHVSAQQYGLNPESL-EKATGIV---LKAIEKVFSKKWNLLVTVGLEHYTAVLVVSMMQSVNELMTENTIRNLWLWHSVEETEHKAVAYDLYQHLYGNGLDAYIPRVGIFTFSLVLITAFSTIYHIVLMKRDKQLTNFKTWRNFFKFASKQYKVLIPKFLEYYRFDFHPNQTDEKALVAATKVKLGINDRSLLLS
2RBD Chain:A ((13-156))--------------------------------------------PLHYGEVFSTWTYL-STNNGLINGYRSFINHTG-DEDLKNLIDEAIQAMQDENHQ---LEELLRSNGVGLPPAPPDRPAARLDDIP-VGARFNDPEISATISMDVAKGLVTCSQIIG---Q-SIREDVALMFSQFHMAKVQFGGKMLKLNKNKG---------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2RBD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 488 -18046 -36.98 -128.90
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain A : 0.56

3D Compatibility (PKB) : -36.98
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.56
QMean score : 0.256

(partial model without unconserved sides chains):
PDB file : Tito_2RBD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2RBD-query.scw
PDB file : Tito_Scwrl_2RBD.pdb: