Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMLFYKNILTLSILAAISIPVFAAENENVEKLETIRIKAHPLEQTSKDFAVADTVVDQKHLTEGAAT-IGDALNSEVGIYANQFGAGS--SRPVIRGQDGPRVKVLQNSSENVDVSTLSPDHAVTVDPV-LAKQVEVIRGPSTLLFGAGTVGGLVNVIDNKIPTQIPENGYEGQVGLRYNTGSDEKLASAGVTVGLGSQVALRIEGLTRDANNYIAPNYIHEGEKERRVDNTFAQGDSVNVGLSWVYDRGYTGISYSNRRDQYGLPGHSHEYETCH---IHDLS-LHCGDHDHEGHSDEEAHDHEHEHGGPWID---LKSERYDFKTELNDPFAGFQKLRAQASYTDYQHDEIEEGTIATRFQNKGYDGRIELVHNPIADWEGVIGTQLGQQKLNLTGEEAFMAPTTTKKWS-VFALEHKQWKDVHFELSARADQQEIDVDDNSKQDFDGSAFSYAGAANWEFAPNYKLSFVASH--QERLPLAQELYANGGHFATNTYELGNDQLSKEKSNNVELGLHFDNDKLDYHLHVYHNWFDDYIYAQTLDRYKDFRLVQYTQDKARFYGAEGEIGYQITPMYKISAFGDYVRGKIDAEGNAPRIPAGRLGTKVDADFG--DGFSGSAEYYHVFNQDK-IAAYETET---EGYNMLNLGVAYSGQYGAKTDYRVYLKANNLLD---DTVYQHASFLSNIPQVGRNFTVGVDFSF
1NQF Chain:A ((7-594))--------------------------------TLVVTANRFEQPRSTVLAPTTVVTRQDIDRWQSTSVNDVLRRLPGVDITQNGGSGQLSSIFIRGTNASHVLVLIDGVR-LNLAGVSGSADLSQFPIALVQRVEYIRGPRSAVYGSDAIGGVVNII-----TTRDEPGTE-------------------ISAGWGSN----------SYQNYDVSTQQQLGDKTR-----------VTLLGDYAHTHG-------------------FLSKTLYGALEHNFTDAWSGFVRGYGYDNRTN------------DTRKLYSQSWDAGLRYNGELIKSQLITSYSHSKDYNY--------ATLDEMKQY--TVQWANNVIVG-HGSIGAGVDMQMQMTTPGTG---DGYDQRNTGIYLTGLQQVGDFTFEGAARSD-------DNSQF---GRHGTWQTSAGWEFIEGYR--FIASYGTSYKAPNLGQLY---GFY-------GNPNLDPEKSKQWEGAFEGLTAGVNWRISGYRNDVSDLI------DYDDHTLKYYNEGKARIKGVEATANFDTGPLTHTVSY-DYVDAR-NAITDTPLLRRAKQQVKYQLDWQLYDFDMGMTMQYLGTRYDKDYSSYPYQTVKMGGVSLWDLAVAYP----VTSHLTVRGKIANLFDKDYETVYGYQT-------AGREYTLSGSYTF


General information:
TITO was launched using:
RESULT:

Template: 1NQF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 3150 107159 34.02 205.68
target 2D structure prediction score : 0.44
Monomeric hydrophicity matching model chain A : 0.69

3D Compatibility (PKB) : 34.02
2D Compatibility (Sec. Struct. Predict.) : 0.44
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.139

(partial model without unconserved sides chains):
PDB file : Tito_1NQF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1NQF-query.scw
PDB file : Tito_Scwrl_1NQF.pdb: