Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSTQPMIEKLIEAHLDFLDEQFAQTQVIQQEFEQFYHWLGSRQLQHLWTFE--QVQQLIQKQILDTPA-SDFLIEQI--AEHIRFALIHPTNDTATVEDVIPVLTIDRIAQYVASKEEHRKKLIKTIVNNPAFSALLTQLIQQTMHDYLDESMTKRVPGVGRFMKMGKSVLETVTDSNLDDTINHYLQKNILKLSQMSKRVLNQHFDNDKLYHFQANVWHKVKTSPLSVLKNYIEVQDLTRTVGLGHEIWDHIRQTDYLKQQVHDGIYTWYVRNQERNFDLLLRDLNIDENLVKHELTELLVPVLQQLVTTGHLRRRARVYLEKFYYSEKALEILNNKGA
3M7V Chain:A ((106-257))---------------------------ITEPFDTFWNGFPEEIISKIEKFSGRKVIREANKPYSGTAVIDDFGPRQMETGELIIYTSADPVLQIAAHEDVIPLDELYRICEYARSITLERPALLGRIIARPYVGKPRNFTRTANRHDY---ALSPFAPTV--LNKLADAGVSTYAVGKINDIFN------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3M7V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 617 22743 36.86 154.71
target 2D structure prediction score : 0.31
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : 36.86
2D Compatibility (Sec. Struct. Predict.) : 0.31
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.171

(partial model without unconserved sides chains):
PDB file : Tito_3M7V.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3M7V-query.scw
PDB file : Tito_Scwrl_3M7V.pdb: