Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDSNMEVLIKTEDAIDAYNGAANLARSLGVSRAAISQ-----WGEY----VPEVSARGLVILQPSIPHIIKKPSAT
5CM3 Chain:A ((38-91))---------------------ATFATSLGLTRGAVSQAVHRVWAAFEDKNLPEGYARVTAVLPEHQAYIVRKWEA-


General information:
TITO was launched using:
RESULT:

Template: 5CM3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 34 -7373 -216.85 -163.84
target 2D structure prediction score : 0.51
Monomeric hydrophicity matching model chain A : 0.72

3D Compatibility (PKB) : -216.85
2D Compatibility (Sec. Struct. Predict.) : 0.51
1D Compatibility (Hydrophobicity) : 0.72
QMean score : 0.427

(partial model without unconserved sides chains):
PDB file : Tito_5CM3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5CM3-query.scw
PDB file : Tito_Scwrl_5CM3.pdb: