Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTRPDSKSMNYQLLKTFSRQ-PIQFG-RFLARLLAGLVNTLKITRTSKSIEL-NLRIA-L-PYLTPQQRIAITEKAVRNELTSYFEFLSIWGSSNSKNISRIHRIEGEHFFHEALAAKKGVVLIVPHFGTWEVMNAWCAQFTSMTILYKPVKNADADRFVREARSREQANLVPTD--ESGVRQIFKALKQGETTVILPDHTPNVGGDMVNYFGVPLASSNLSAKLIQKTKAKALFLYAIRNENDGFTIHIEPMDEKIYEGTADDGTYVIHQAIEQLIYQYPEHYHWSYKRFKANPAL-DNIYNIDPTEALK-IVDRLKAEALKTSTQPEPIQTSVM
4G3A Chain:A ((5-231))--KPSD-------LDGFIQQMP-KADMRVKVQLAEDLVTFLSDDTNSIVCTDMGFLIDGLMPWLTGSH-----FKIAQKSLEAFSELIKRLGSDFNAY-------------------------------TATVLPHVIDRLGD-----------------SRDTVREKAQLLLRDLMEHRVLPPQALIDKLATSCF------------------KHKNAKVREEFLQ-TIVNALHEY--GTQQLSVRVYIPPVCALLG-----DPTVNVREAAIQTLVEIYKHVG---DRLRPDLRRMDDV----PASKLAMLEQKFDQVKLE-------------


General information:
TITO was launched using:
RESULT:

Template: 4G3A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 934 21598 23.12 99.07
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : 23.12
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.310

(partial model without unconserved sides chains):
PDB file : Tito_4G3A.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4G3A-query.scw
PDB file : Tito_Scwrl_4G3A.pdb: