Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAIQRSGRFERIKKPLKSDMNVVPYIDVMLVLLVIFMVTAPMITSGIKVDLPQANNHPIESK-DMPAMVTIGKDGNIYLQYEDYKDNEPLSLEKLESVLSEAQKKAEQENKQLTVLVNGDKTRPYGEVVSLMASLQEAGLTQVGLLTEPLK
3CW2 Chain:C ((165-214))--------------------------------------------------LEEASKHAEERKVKMSGLITV-------------RTNEPLGVEKIKEVISKALENIEQDYESL--------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3CW2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 26 4632 178.13 94.52
target 2D structure prediction score : 0.51
Monomeric hydrophicity matching model chain C : 0.57

3D Compatibility (PKB) : 178.13
2D Compatibility (Sec. Struct. Predict.) : 0.51
1D Compatibility (Hydrophobicity) : 0.57
QMean score : 0.460

(partial model without unconserved sides chains):
PDB file : Tito_3CW2.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3CW2-query.scw
PDB file : Tito_Scwrl_3CW2.pdb: