Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQRQLVSSSRVEQKNWDRP-----------VLSEWIEQFVNTVQAVQ-TPVQIVAHSFGCLTSVAALAEHPELQLQVKKLILVAPANPARFGE--A-----------GF-------------------ARH---S-LT---DY--------KD---------YFHQ--LKINVPATLLISENDPWLDFFDALQLAKSW-QLTPINLGQVGHINVASGFGPFPDLLNHLLPEDSMCSHSSIDPVKTHFSLKFA
3QVM Chain:B ((56-280))------TVIVFDYVGSGQSDLESFSTKRYSSLEGYAKDVEEILVALDLVNVSIIGHSVSSIIAGIASTHVG---DRISDITMICPSPCFMNFPPDYVGGFERDDLEELINLMDKNYIGWANYLAPLVMGASHSSELIGELSGSFCTTDPIVAKTFAKATFFSDYRSLLEDISTPALIFQSAKDSLASPEVGQYMAENIPNSQLELIQAEGHCLHMTDAGLITPLLIHFIQNNQT------------------


General information:
TITO was launched using:
RESULT:

Template: 3QVM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 552 -20276 -36.73 -131.66
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain B : 0.60

3D Compatibility (PKB) : -36.73
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.421

(partial model without unconserved sides chains):
PDB file : Tito_3QVM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3QVM-query.scw
PDB file : Tito_Scwrl_3QVM.pdb: