Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPPRIRRSVMRQFTSLQVAILALGSLCFSTAYADSTLVPMSDAELSATRGQALMSMSYIAPNDSANLEKLRDSSSNVGFYKLGLEAELEINANIRKLQLGCGGVNGAGGCDIDFDNVSLSGVADTREGRVASDAKLTNPFLEFAIKNPNSASTREVAGIRLSAEAVEGLLTIGTENSATPNGINSLSGYMVVAPQVGEATVDAARITQTGSPACGVYPSPAGCGVNQAITGKARGKIALGAGFNLDFQTKSYDITLTPTQKAQLSLPQSVVSGQRMSSVNLLASAIVNGIDLSGTLAADVDILGGITLNGN----LRGTINNLPVTVPLLENLGYIHKINLSGSPLSLSMQGQDIRWPGTVSTAMRGWWLELSNPIDIGRIDPTNSVVIKTDTIRDALTEVSKELTQNPLNCGFLAVNCIGGDFNVGTRDLSNARPALLELQNLQLANQSFAPNCYGSLKFC
7CGT Chain:A ((437-479))---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NLSTSASITGLSTSLPTGSYTDVLGGV-LNGNNITSTNGSINNF-------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 7CGT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 64 3013 47.07 77.24
target 2D structure prediction score : 0.44
Monomeric hydrophicity matching model chain A : 0.52

3D Compatibility (PKB) : 47.07
2D Compatibility (Sec. Struct. Predict.) : 0.44
1D Compatibility (Hydrophobicity) : 0.52
QMean score : 0.127

(partial model without unconserved sides chains):
PDB file : Tito_7CGT.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-7CGT-query.scw
PDB file : Tito_Scwrl_7CGT.pdb: