Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFSIFYGKEKLAPSPNKIDILRSLVGGTVSIFILLWLSKLTHNIFIMAPFGATCVLLYTVSQSPLAQPRNIIFGHLISAFVGLFFLKFIGVSIFTIAFSVGCAIALMQVFKCVHPPAGANPLVILLTASSIHYEWNFLIFPVLVGAVSLVLVAMLINNIKASTKWPMYGLGILNTKK
2MF3 Chain:A ((25-42))-----------------------------------------------------------CSNGPIARPWEMMVGNCM----------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2MF3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 24 -4478 -186.58 -248.78
target 2D structure prediction score : 0.50
Monomeric hydrophicity matching model chain A : 0.39

3D Compatibility (PKB) : -186.58
2D Compatibility (Sec. Struct. Predict.) : 0.50
1D Compatibility (Hydrophobicity) : 0.39
QMean score : 0.628

(partial model without unconserved sides chains):
PDB file : Tito_2MF3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2MF3-query.scw
PDB file : Tito_Scwrl_2MF3.pdb: