Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLQIKAKEEITMAKVCYFTGRKTKSGNNRSHAMNSTKRTVKPNLQKVRVMVDGKPKKVWVSTRALKSGKVERV
5GAD Chain:Y ((2-47))------------SRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEKRFV---------------


General information:
TITO was launched using:
RESULT:

Template: 5GAD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain Y - contact count / total energy / energy per contact / energy per residue : 79 5129 64.92 111.50
target 2D structure prediction score : 0.48
Monomeric hydrophicity matching model chain Y : 0.73

3D Compatibility (PKB) : 64.92
2D Compatibility (Sec. Struct. Predict.) : 0.48
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.314

(partial model without unconserved sides chains):
PDB file : Tito_5GAD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5GAD-query.scw
PDB file : Tito_Scwrl_5GAD.pdb: