Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRGYVQMEKSEGSLRRKSMNPVSPLFEKIDASIEKKANLFENSFSRYAVRAVLACLFLTLGTAVAFAIAMKGEDIAHGLGKILYAFMFSWGLVMILYMNAELGTSNMLYMTVGVFRQRLALSKAAKILFACIFFNMIGGILCGFLISMTTPFQDLTLDNFMLESIAV-KLAKPSATILVEGMFANIVVNTAVLISMRMKEDVGKVITVVFIIFIFAFLGYEHVIANFPAFTLTYFASHGQMDGMTVSNVLHNLFFALAGNYIGGGLVMGLGYAWLNQSKSSYVD
4FC4 Chain:A ((7-249))--------------------------NKCAANAARIARLSANNPLGFWVSSAMAGAYVGLGIILIFTL---GNLLDPSVRPLVMGATFGIALTLVIIAGSELFTGHTMFLTLGVKAGTISHGQMWAILPQTWLGNLVGSVFVALLYSWGGG-SLLPVDTSIVHSVALAKTTAPATVLFFKGALCNWLVCLAIWMAIR-TEGTAKFLAIWWCLLAFIASGYEHSVANMTLFALSWFGHHS--DAYTLAGIGHNLLWVTLGNTLSGVVFMGLGY-WYAT-------


General information:
TITO was launched using:
RESULT:

Template: 4FC4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1283 -233973 -182.36 -966.83
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain A : 0.79

3D Compatibility (PKB) : -182.36
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.79
QMean score : 0.383

(partial model without unconserved sides chains):
PDB file : Tito_4FC4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4FC4-query.scw
PDB file : Tito_Scwrl_4FC4.pdb: