Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFFQIQYKSSTRDGGNNVNGLFITIEGPDGAGKTSILNELYPLLKEVAKTEIIQTREPGGIPIAEEIRAVILDPKNDRMDERTEALLYAAARRQHLVEKVLPALAKGKIVLCDRFVDSSLAYQGAGRRIGVTEIARLNEFATEGTTPDFTLYLDVDSDTGLRRIKKNRQNQIDRLDSEGLEFHQRVRHAYLKLAEENPERIHKVDARKSFEEVLQTSYHTIIEQYPQFFEN
4HLC Chain:A ((4-200))---------------------FITFEGPEGSGKTTVINEVYHRL--VKDYDVIMTREPGGVPTGEEIRKIVLE-GND-MDIRTEAMLFAASRREHLVLKVIPALKEGKVVLCDRYIDSSLAYQGYARGIGVEEVRALNEFAINGLYPDLTIYLNVSAEVGRERIIK--------LDQEDLKFHEKVIEGYQEIIHNESQRFKSVNADQPLENVVEDTYQTIIK--------


General information:
TITO was launched using:
RESULT:

Template: 4HLC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 887 -87553 -98.71 -460.80
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain A : 0.85

3D Compatibility (PKB) : -98.71
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.85
QMean score : 0.552

(partial model without unconserved sides chains):
PDB file : Tito_4HLC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4HLC-query.scw
PDB file : Tito_Scwrl_4HLC.pdb: