Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRGNPEVIDYLNMLIGGELAARDQYLIHSRMYEDWGLNKIYERIDHEMQEEASHADAIIRRVLFLGAKPNMHR-EDINVGTDVVSCLKADLALEYHVREKLATGIKLCEEKGDYISRDMLRQQLSDTEEDHTYWLEKQLRLIELIGLQNYIQSQI
3E1L Chain:H ((1-154))MKGDTKVINYLNKLLGNELVAINQYFLHARMFKNWGLKRLNDVEYHESIDEMKHADRYIERILFLEGLPNLQDLGKLNIGEDVEEMLRSDLALELDGAKNLREAIGYADSVHDYVSRDMMIEILRD-EEGHIDWLETELDLIQKMGLQNYLQAQI


General information:
TITO was launched using:
RESULT:

Template: 3E1L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain H - contact count / total energy / energy per contact / energy per residue : 595 -10335 -17.37 -67.55
target 2D structure prediction score : 0.82
Monomeric hydrophicity matching model chain H : 0.83

3D Compatibility (PKB) : -17.37
2D Compatibility (Sec. Struct. Predict.) : 0.82
1D Compatibility (Hydrophobicity) : 0.83
QMean score : 0.672

(partial model without unconserved sides chains):
PDB file : Tito_3E1L.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3E1L-query.scw
PDB file : Tito_Scwrl_3E1L.pdb: