Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAFAKISQVAHYVPEQVVTNHDLAQIMDTNDEWISSRTGIRQRHISRTESTSDLATEVAKKLMAKAGITGEELDFIILATITPDSMMPSTAARVQANIGANKAFAFDLTAACSGFVFALSTAEKFIASGRFQKGLVIGSETLSKAVDWSDRSTAVLFGDGAGGVLLEASEQ-EHFLAESLNSDGSRS-ECLTYGHSGLHSPFSDQESADSFLKMDGRTVFDFAIRDVAKSIKQTIDESPIEVTDLDYLLLHQANDRILDKMARKIGVDRAKLPANMMEYGNTSAASIPILLSECVEQGLIPLDGSQTVLLSGFGGGLTWGTLILTI
4X0O Chain:E ((3-324))QCYAEITGWGKCLPPATLSNHDLSTFLDTSDEWIQSRTGIEQRRISH-VNTSDLATVAAQHAIACAGVSVEEIDLIIVATCSPDSLIPNIASRVQQNLGIPSAAAFDLNAA-TGFLYGLETATRLMQASHYRHALVIGAERLSFYLDWTKRDTAVLFGDGAGAVVLSKTEQKVGLQDAQIGCDAQGRDIL-AVPKFGTAMDRFDADNGYWAFDFVGKEIFKRAVRGMGAAAQQVLARSGLSTEEIDVVIPHQANIRIIQTLCDLAGIAQDKAFVNIHRYGNTSAATVPIALCEALEQG--KIKPHDDLLVAAFGAGLTWGAGHIRW


General information:
TITO was launched using:
RESULT:

Template: 4X0O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain E - contact count / total energy / energy per contact / energy per residue : 2024 -120028 -59.30 -376.26
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain E : 0.83

3D Compatibility (PKB) : -59.30
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.83
QMean score : 0.529

(partial model without unconserved sides chains):
PDB file : Tito_4X0O.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4X0O-query.scw
PDB file : Tito_Scwrl_4X0O.pdb: