Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFFQIQYKSSTRDGGNNVNGLFITIEGPDGAGKTSILNELYPLLKEVAKTEIIQTREPGGIPIAEEIRAVILDPKNDRMDERTEALLYAAARRQHLVEKVLPALAKGKIVLCDRFVDSSLAYQGAGRRIGVTEIARLNEFATEGTTPDFTLYLDVDSDTGLRRIKKNRQNQIDRLDSEGLEFHQRVRHAYLKLAEENPERIHKVDARKSFEEVLQTSYHTIIEQYPQFFEN
3HJN Chain:A ((1-192))--------------------MFITFEGIDGSGKSTQIQLLAQYLEK-RGKKVILKREPGGTETGEKIRKILLEEE---VTPKAELFLFLASRN-LLVTEIKQYLSEGYAVLLDRYTDSSVAYQGFGRNLGKEIVEELNDFATDGLIPDLTFYIDVDVETALKRK---N-R----FE--KREFLERVREGYLVLAREHPERIVVLDGKRSIEEIHRDVVREVKRR-------


General information:
TITO was launched using:
RESULT:

Template: 3HJN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 943 -75910 -80.50 -401.64
target 2D structure prediction score : 0.71
Monomeric hydrophicity matching model chain A : 0.80

3D Compatibility (PKB) : -80.50
2D Compatibility (Sec. Struct. Predict.) : 0.71
1D Compatibility (Hydrophobicity) : 0.80
QMean score : 0.579

(partial model without unconserved sides chains):
PDB file : Tito_3HJN.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3HJN-query.scw
PDB file : Tito_Scwrl_3HJN.pdb: