Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLERPITFFFRGGQQQVENVVPTMTVLQFLREYTQTGKTRQTGTKEGCAEGDCGACTVVIGELVNDNLQLRSVNACIQFLLTL-DGKALFTVEDLHSLLPVQDGTLHPVQQAMVDMHGSQCGFCTPGFIMSLWSMYENEQQSLSKDKISDYLSG--NLCRCTGYRPILDAAQKAYDYPRVVLERQKVIDVLKEIRTLPALHLNDQKQQFFAPKTLQDFATLRLQLPQARIVAGSTDVGLWVTKQGRDLGDILYIGQVEELKKIVVTDHTLTIGANVSLSDALIKISDFYPDFQELQRRFASMPIKNAGTLGGNIANGSPIGDSMPALITLGTRLILRVGEQTREIALEDFYLDYQKTALQLGEFVEAIVIPLREGQTRFKFASYKIAKRFEQDISAVCAAISCELDPHYIAHNVRIAFGGMAAIPKRAKYTEAILEDQQITAELIVQAQEALSQDYQPLDDGRASSAYRLHVAKNCLKRFYVEKILSQTLTRVNDLIAMVEI
4C80 Chain:A ((34-152))-----------------------------------------TGVKVGCEQGQCGACSVI--------LDGKVVRACVTKMKRVADGAQITTIEGVG-----QPENLHPLQKAWVLHGGAQCGFCSPGFIVSAKGLLDTNADP-SREDVRDWFQKHRNACRCTGYKPLVDAVMDA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4C80.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 527 -23169 -43.96 -199.73
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain A : 0.57

3D Compatibility (PKB) : -43.96
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.57
QMean score : 0.445

(partial model without unconserved sides chains):
PDB file : Tito_4C80.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4C80-query.scw
PDB file : Tito_Scwrl_4C80.pdb: