Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMCRILGLSRQSYYYQSKPKKD-----------------ESELEEVVAEEFIRSRKAYGSRKIKKALSKR-----GIQISRRKISRIMKNRGLKSSYTVAYFKVHHSTCNEAKTTNVLNS
6PAX Chain:A ((39-130))ISRILQVSNGCVSKILGRYYATGSIRPRAIGGSKPRVATPEVVSKIAQYKQE-CPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASE--------------------------


General information:
TITO was launched using:
RESULT:

Template: 6PAX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 96 3406 35.48 48.66
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain A : 0.60

3D Compatibility (PKB) : 35.48
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.652

(partial model without unconserved sides chains):
PDB file : Tito_6PAX.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-6PAX-query.scw
PDB file : Tito_Scwrl_6PAX.pdb: