Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKERFQMKKYQWGIVGLGTIAHEFAESFNQE--TSELTAVASRTSEKAENFAHRYNIPKAYGSYQEMLDDAEIDIVYIAVPNRQHIDHILAALEAGKHVLCEKAITMNKKELADAMRLAEEK-NLILAEAMTIFNMPLYQQLRSIMDTGKLGALKMIQAPFGSYKE-PDP-KNRFFNPELAGGALLDIGTYAVSFARFFLSSQPEVV-ASTM-VP----FETGVDEQSVTILRNKENELAAVSLTFQA--KMPKVGIVAFENGYVTIADYPRADRAEILFTDGTKEF-IESG--NTSEAMNYEIKNMVHMIEGDLPN-RSLFLTKDVIEILDQMQVLWKNM
3CEA Chain:B ((5-337))-----TRKPLRAAIIGLGRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKNELGVETTYTNYKDMIDTENIDAIFIVAPTPFHPEMTIYAMNAGLNVFCEKPLGLDFNEVDEMAKVIKSHPNQIFQSGFMRRYDDSYRYAKKIVDNGDIGKIIYMRGYGIDPISGMESFTKFA-TEADSGGIFVDMNIHDIDLIRWFTGQDPVQAYGLTSNIAAPQLADIGEFETGVAQLKMSDGVIATLIGGRHAAHGNQVELEVMGSNGWVRIGEHPDLNRVTVFNDQGVVRPSLQSFGERFDTAFTDEVQDFVNNVIVGKQPEVTVDDGIKALKIAKACQQSAN--


General information:
TITO was launched using:
RESULT:

Template: 3CEA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1653 -25028 -15.14 -79.20
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain B : 0.69

3D Compatibility (PKB) : -15.14
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.546

(partial model without unconserved sides chains):
PDB file : Tito_3CEA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3CEA-query.scw
PDB file : Tito_Scwrl_3CEA.pdb: