Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKLVTAIVKPFKLDDVREALSDIGVQGITVTEVKGFGRQKGHTELYRGAEYVVDFLPKVKIEIAISDEMVDAVIESITRVASTGKIGDGKIFLTNLEQVIRIRTGETGPDAV
2J9C Chain:C ((3-114))MKKVEAIIRPEKLEIVKKALSDAGYVGMTVSEVKGRGVQGGIVERYRGREYIVDLIPKVKIELVVKEEDVDNVIDIICENARTGNPGDGKIFVIPVERVVRVRTKEEGKEAL


General information:
TITO was launched using:
RESULT:

Template: 2J9C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 430 -54013 -125.61 -482.25
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain C : 0.84

3D Compatibility (PKB) : -125.61
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.84
QMean score : 0.509

(partial model without unconserved sides chains):
PDB file : Tito_2J9C.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2J9C-query.scw
PDB file : Tito_Scwrl_2J9C.pdb: