Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMECSMNLADRDGFIWQDGQLIDWRDAKIHVLTHTLHYSMGVFEGVRAYETPKGTAIFRLQDHTKRLLNSAKIYQMKVPYDQAALEQAQIDVVRENKLASCYLRPLIWIGSEKLGIAATN-NTIHAAVAAWAWGAYLGDEAMAKGIRVKTSSFTHHHPNVTMCKAKASGNYTLSILAHQEVAHSGYDEAMLMDPQGYVCQGSGENVFLIKDGVLHTPDIAGGALDGITRQTVMTIAKDLGYEVVERRITRDEFYIADEAFFTGTAAEVTPIREYDDRQIGAGCRGPITTEIQKTFFDAVQGKKPKYEHWLTYVK
5CM0 Chain:A ((3-288))----------ELLVYMNGEFVPESQAKVSVFDHGFLYGDGVFEGIRAYNGK----VFKLYEHIDRLYDCARVIDLKIPLSKEEFAEAILETLRRNNLRDAYIRPIVTRGAGDLGLDPRKCPSPNVIIITKPW---------EKGLKAITVAIRRNAIDSLPPNIK-SLNYLNNILAKIEANAKGGDEAIFLDHNGYISEGSGDNIFIVKNGTITTPPTL-NNLKGITRQVVIELINELEIPFREANIGLFDLYSADEIFVTGTAAEIAPVTYIDGRTVGNGKPGKVTKMLMEKFRERTENEGV----------


General information:
TITO was launched using:
RESULT:

Template: 5CM0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1475 -54067 -36.66 -195.19
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain A : 0.77

3D Compatibility (PKB) : -36.66
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.456

(partial model without unconserved sides chains):
PDB file : Tito_5CM0.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5CM0-query.scw
PDB file : Tito_Scwrl_5CM0.pdb: