Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSSLSQVNADVLKQAQQRIQQDLLTTLAAFSIPEPLKSAVHHAVMLGGKRVRPALCYATASLQDNPNFAAARRAAVAVELIHCYSLAHDDLPCMDNDLLRRGQPTCHVAFGEDTALLAGDILQSMAFEVLGSRLFDE--QGQGTDAAIVLKQIQILATAS--SKMVCGQVLDLQAEAKQISQDELENIHRNKTGALIQAAIMMGAVTIFPGTDQAIPKLRQYGQAIGLAFQVQDDILDITSSTETLGKTAGKDEQVQKSTYPALMGLEQAQIYAKELHDQAFEALAHFGE-NAKELVEISQFLLARTN
5XN5 Chain:A ((4-305))------DFNAYMGEKAAAVNRALDASIPADEPPAALHEAMRYALLAGGKRVRPALCLAACAVV-GGREAWAMPAAAAVEMVHTMSLVHDDLPCMDDDDLRRGKPTCHVVYGEPIAVLTGDALLSLSFHHMARFDSYPPDIDADKHPARVVRAIGELARCIGSEGLVAGQVVDLEMT---VPLERLEYIHLHKTAALLEASVVIGAIL-GGGSDEQIESLRMYARSIGLLFQVVDDILDVT-----------KDLASDKTTYPKLLGLEKSREFAEKLLSDAREQLSGFDQETAAPLLHLANYIAYRQN


General information:
TITO was launched using:
RESULT:

Template: 5XN5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1417 -78994 -55.75 -281.12
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain A : 0.79

3D Compatibility (PKB) : -55.75
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.79
QMean score : 0.546

(partial model without unconserved sides chains):
PDB file : Tito_5XN5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5XN5-query.scw
PDB file : Tito_Scwrl_5XN5.pdb: