Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRIAGRLAAEVLDMIKPHIKAGVSTLELDTICRNHIENV-QHAIPACVGYGGAPGRPAFQHSICTSVNHVVCHGIPSENKILKNGDILNIDVTVIKDGYHGDTNMMYIVGGETSILANRLCKVAQEAMYRGMATVRDGSYLGDIGHAIQKHVESERFSVVREYCGHGIGTVFHDEPQVLHYGQAGTGMRLEAGMTFTIEPMVNAGVWQTKLLGDKWTVVTKDHKLSAQYEHTILVTKTGIEVLTARPEEDLSRFNQ
4IKR Chain:A ((84-327))MRLVCRLAREVLDVAAGMIKPGVTTEEIDHAV--HLACIARNCYPSPLNYYN------FPKSCCTSVNEVICHGIP-DRRPLQEGDIVNVDITLYRNGYHGDLNETFFVG-EVDDGARKLVQTTYECLMQAIDAVKPGVRYRELGNIIQKHAQANGFSVVRSYCGHGIHKLFHTAPNVPHYAKNKAVGVMKSGHVFTIEPMICEGGWQDETWPDGWTAVTRDGKRSAQFEHTLLVTDTGCEILTRRLDSARPHF--


General information:
TITO was launched using:
RESULT:

Template: 4IKR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1464 -50277 -34.34 -206.90
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain A : 0.84

3D Compatibility (PKB) : -34.34
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.84
QMean score : 0.395

(partial model without unconserved sides chains):
PDB file : Tito_4IKR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4IKR-query.scw
PDB file : Tito_Scwrl_4IKR.pdb: