Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVDYKTFDPDLWAAIAKEEERQEHNLELIASENFVSEAVMAAQGSILTNKYAEGYPGHRYYGGCEFVDIVENLAIDRAKELFG----AKFANVQPHSGSQANTAAYLALVEPGDTILGMDLSAGGHLTHG-----SPVNFSGKTYHFVAYGVDPTTEVIDYNVVRILARKHQPKLIVAGASAYGRTIDFAKFREIADEVGAKLMVDMAHIAGLVAAGLHPNPVPYADITTTTTHKTLRGPRGGM----------ILTNDEALAKKINSAVFPGIQGGPLEHVIAGKAVAFKEALDPAFKEYSEQIIANAKAMVKVFNQAIGTRVISGATDNHLMLIDVRELGINGKEAESILDSVNITVNKNSIPFETLSPFKTSGIRIGTPAITTRGFKEEDAVKVAELVVKAL----QAKDDNAQLDEVKTGVRELTEKFPLHKK
1RVU Chain:A ((26-451))----KDSDAEVYDIIKKESNRQRVGLELIASENFASRAVLEALGSCLNNKYSQGYPGQRYYGGTEHIDELETLCQKRALQAYGLDPQCWGVNVQPYSGSPANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAYKVNPDTGYIDYDRLEENARLFHPKLIIAGTSCYSRNLDYGRLRKIADENGAYLMADMAHISGLVVAGVVPSPFEHCHVVTTTTHKTLRGCRAGMIFYRRGVRSEILYNLESL---INSAVFPGLQGGPHNHAIAGVAVALKQAMTPEFKEYQRQVVANCRALSAALVE-LGYKIVTGGSDNHLILVDLRSKGTDGGRAEKVLEACSIACNKNTCPGDK-SALRPSGLRLGTPALTSRGLLEKDFQKVAHFIHRGIELTVQIQDDTGP----RATLKEFKEKL-----


General information:
TITO was launched using:
RESULT:

Template: 1RVU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2330 -41530 -17.82 -104.87
target 2D structure prediction score : 0.72
Monomeric hydrophicity matching model chain A : 0.82

3D Compatibility (PKB) : -17.82
2D Compatibility (Sec. Struct. Predict.) : 0.72
1D Compatibility (Hydrophobicity) : 0.82
QMean score : 0.493

(partial model without unconserved sides chains):
PDB file : Tito_1RVU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1RVU-query.scw
PDB file : Tito_Scwrl_1RVU.pdb: