Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence--MQQQVIIVGGGMVGLSLSLMLAKANIAVKLLEAVKYPNYDDQNVAPYHSSFDARNTALSRRSVQIYQKLGLWDALQQHATPILQVHITEQGSFGKARLIAEQEKVESFGQVIENAWLGRVLLTQVRQQPLIELIDGVQVTALTQDAEQVHIEAQRGDEVLKLESKLLIAADGRDSFCRQAIGVGVDVHDYDQVAIVTTVQTSKPHEHVGFERFSALGPLALLPLPGEYRRSVVWPVKKGTEGEWLGEENDQHFLDALQKTYGDRAGKFEKTGKRFSYPLSQVLAHKQAVGRIILMGNAAHTIHPVAGQGFNLCLRDADVLLRYLVNQLSASDDIGNPDNLLAYEEARLSDQQRVIKFCDTVVRGFSNQNPLLKLIRNTGLIAFDVIPGVKPLVANYA---------------MGLKA----------------------------------------------------------------------------------------------------
2QA1 Chain:A ((8-500))HRSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVE-TGES------------RGLGFTARTMEVFDQRGILPRFGEVETS------TQGHFGGLPIDFGVLEGAWQAAKTVPQSVTETHLEQWATGLG-ADIRRGHEVLSLTDDGAGVTVEVRGPEGKHTLRAAYLVGCDGGRSSVRKAAGFDFPGTAATMEMYLADIKGVELQPRMIGETLPG-GMVMVGPLPGGITRIIVCERGTPPP------PSWHEVADAWKRLTGDDIAHAEPVWVS-AFGNATRQVTEYRRGRVILAGDSAHIHLPAGGQGMNTSIQDAVNLGWKLGAVVNGT---ATEELLDSYHSERHAVGKRLLMNTQAQGLLFLS-GPEVQPLRDVLTELIQYGEVARHLAGMVSGLEITYDVGTGSHPLLGKRMPALELTTATRETSSTELLHTARGVLLDLADNPRLRARAAAWSDRVDIVTAVPGEVSATSGLRDTTAVLIRPDGHVAWAAPGSHHDLPMALERWFGAPLTG


General information:
TITO was launched using:
RESULT:

Template: 2QA1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2167 8138 3.76 21.99
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : 3.76
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.430

(partial model without unconserved sides chains):
PDB file : Tito_2QA1.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2QA1-query.scw
PDB file : Tito_Scwrl_2QA1.pdb: