Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEDQYVQAMTIAGSDSDGSAGMQADMHTFFTRNVYGVSVMTACVA--GNSYGIGASVTLPTDFIDKEFELIAKDFQIRAAKTGMLADSKLIETVVKNYQKYDFGPLVVDPVIVTKHG-NLLLEESALQSLKEKLVPLAEVLTPNFYEAEKLTGRTL-AAEEDFVQAAKELQDMGAKNVMIKGHHAKNAQQ------ETVNDYVLFESGKSFWLNAPFYPTDRINGTGDSLSACIAAELAKGKTVEQAIRLAKDYVNRAIREEINVGHKYGPINHWAAGELE
2I5B Chain:A ((3-259))----MHKALTIAGSDSSGGAGIQADLKTFQEKNVYGMTALTVIVAMDPNNSWNHQVFPIDTDTIRAQLATITDGIGVDAMKTGMLPTVDIIELAAKTIKEKQLKNVVIDPVMVCKGANEVLYPE-HAQALREQLAPLATVITPNLFEASQLSGMDELKTVDDMIEAAKKIHALGAQYVVITGGGK----LKHEKAVD----VL-YDGETAEVLESEMIDTPYTHGAGCTFSAAVTAELAKGAEVKEAIYAAKEFITAAIKESFPLNQYVGP----------


General information:
TITO was launched using:
RESULT:

Template: 2I5B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1456 19966 13.71 80.83
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain A : 0.81

3D Compatibility (PKB) : 13.71
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.81
QMean score : 0.554

(partial model without unconserved sides chains):
PDB file : Tito_2I5B.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2I5B-query.scw
PDB file : Tito_Scwrl_2I5B.pdb: