Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSSKANHAKTVICGIINVTPDSFSDGGQFFALEQALQQARKLIAEGASMLDIGGESTRPGSSYVEIEEEIQRVVPVIKAIRKESDVLISIDTWKSQVAEAALAAGADLVNDITGLMGDEKMPHVVAEARAQVVIMFNPVMARPQHPSSLIFPHFGFGQAFTEEELADFETLPIEELMEAFFERALARAAEAGIAPENILLDPGIGFGLTKKENLLLLRDLDKLHQKGYPIFLGVSRKRFVINILEENGFEVNPETELGFRNRDTASAHVTSIAARQGVEVVRVHDVASHRMAVEIASAIRLADEAENLDLKQYK
2DZA Chain:B ((24-286))----LDLDRVRLLGVLNLTPDS------------ALERAREMVAEGADILDLGAESTRP---PVPVEEEKRRLLPVLEAVLS-LGVPVSVDTRKPEVAEEALKLGAHLLNDVTGLR-DERMVALAARHGVAAVVMHMPVP-DPATMM------A----------HARY-RDVV-AEVKAFLEAQARRALSAGVP--QVVLDPGFGFGKLLEHNLALLRRLDEIVALGHPVLVGLSRKRTIGELSGVE----------DPAQRVHGSVAAHLFAVMKGVRLLRVHDVRAHREALGVWEALY--------------


General information:
TITO was launched using:
RESULT:

Template: 2DZA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1373 -159489 -116.16 -643.10
target 2D structure prediction score : 0.71
Monomeric hydrophicity matching model chain B : 0.75

3D Compatibility (PKB) : -116.16
2D Compatibility (Sec. Struct. Predict.) : 0.71
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.583

(partial model without unconserved sides chains):
PDB file : Tito_2DZA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2DZA-query.scw
PDB file : Tito_Scwrl_2DZA.pdb: