Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MEFSKKTRELSIKKMQERTLDLLIIGGGITGAGVALQAAASGLETGLIEMQDFAEGTSSRSTKLVHGGLRYLKQ-FDVEVVSDTVSERAVVQQIAP------HIPKPDPMLLPVYDEDGATFSLFRLKVAMDLYDLLAGVSNTPTANKVLSKDQVLERQPNLKKEGLVGGGVY-LDFRNNDARLVIENIKRANQDGALIANHVKAEGFLFDESGKITGVVARDLLTDQVFEIKARLVINTTGPWSDKVRNLSNKGTQFSQMRPTKGVHLVVDSSKIKVSQPVYFDTGLGDGRMVFVLPRE-NKTYFGTTDTDYTGDLEHPKVTQEDVDYLLGIVNNRFPESNITIDDIESSWAGLRPLIAGNSASDYNGGNNGTISDESFDNLIATVESYLSKEKTREDVESAVSKLESSTSEKHLDPSAVSRGSSLDRDDNGLLTLAGGKITDYRKMGDEALWSAWLTSSKQNLTVALN 1RYI Chain:C ((14-321)) ---------------MKRHYEAVVIGGGIIGSAIAYYLAKENKNTALFESGTMGGRTTSAAAGMLGAHAECEERDAFFDFAMHSQRLYKGLGEELYALSGVDIRQHNGGMFKLAFSEED-------V---LQLRQMD----DLD-SVSWYSKEEVLEKEPYASGD-IFGASFIQDDVHVEPYFVCKAYVKAAKMLGAEIFEHTPVLHVERD-G-EALFIKTP------SGDVWANHVVVASGVWSGMFFKQLG---LNNAFLPVKGECLSVWNDDIPL-TKTL------YHDHCYIVPRKSGRLVVGATMKPGD---WSETPDLGGLESVMKKAKTMLPAI--QNMKVDRFWAGLRPGTKDG------------------------------------------------------------------------------------------------------------

General information: TITO was launched using: RESULT: Template: 1RYI.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 1557 16340 10.49 54.65 target 2D structure prediction score : 0.62 Monomeric hydrophicity matching model chain C : 0.62 3D Compatibility (PKB) : 10.49 2D Compatibility (Sec. Struct. Predict.) : 0.62 1D Compatibility (Hydrophobicity) : 0.62 QMean score : 0.415

(partial model without unconserved sides chains): PDB file : Tito_1RYI.pdb: (Unconserved sides chains are recalculated) : Sequence: align-1RYI-query.scw PDB file : Tito_Scwrl_1RYI.pdb: