Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMNQTVLDVKNLKTEFITDKKAFPIIKDVNFTLERGKVLGIVGESGCGKSVTVNTVLNLLPKNGRIAEGEITYFDEDKPIELQKLKQYGKEFRKLRGENISMIFQDPMSALNPVYTIGNQITEVLHEHYD--ISKEEANKRAIEMLEKLGIHNAAERMNDYPHQFSGGQRQRIVIAIAMVCNPDILIADEPTTALDVTIQAQILDLLDDLRKEHGTSIILITHDLGVIAQIADEVAVMYAGEVVEVGTVAQIFDQPKHPYTRS----LLRSIPNPENMD--K--K----------LH--------VIQG----SVPS----IS----EIS-EK----------------------------------GCRFANR-----------IP--WLE--K--------EHHEE--------------------------------EPQ-----------L-----------HD-------------------LG---D-----------GHF-------V--------------------------RCSCYKHFF-----F-----------------E-------------------D--KEE---ETL-------AEKHVGNVVLEVKNIKKYYYPKKQLFKPLGSPLKALDDVSLELRKGTTIGIVGESGSGKSTIAKSLMKLHDITDGEINIDLNGKTQNIYGIKRKEDLDFRKKVQMVFQDPYASLNPTKKIYNSFDEPMIVHNIGNKEERFERMKEALKMVNVPV----------EYLERYPHEFSGGQRQRLCIARALCMKPEILILDEPVSALDLSVQAQVLNYLVEIQNKEDLTYVFISHDLGVVKYMCDYLYVIHKGRIVEAGSREDIYNNPMHIYTKKLLAAIPEVDYHFKEALATKRKENEVEFKAQYHEFYDEDGRAYDLKQVSPTHFVALKPE
5KO2 Chain:A ((386-1226))---GNLEFKNIHFSYPSR-KEVQILKGLNLKVKSGQTVALVGNSGCGKSTTVQLMQRLYDPL----DGMVSIDGQD----IRTI-----NV-RYLREIIGVVSQEPVL--F-ATTIAENIRYGREDVTMDEIEKAVKEANAYDFIMKLPHQ-FDTLVGERGAQLSGGQKQRIAIARALVRNPKILLLDQATSALDTESEAVVQAALDKAR--EGRTTIVIAHRLSTVR-NADVIAGFDGGVIVEQGNHDELMREKGIYFKLVMTQT----------DVPPASFWRILKLNSTEWPYFVVGIFCAIINGGLQPAFSVIFSKVVGVFTNGGPPETQRQNSNLFSLLFLILGIISFITFFLQGFTFGKAGEILTKRLRYMVFKSMLRQDVSWFDDPKNTTGALTTRLANDAAQVKGATGSRLAVIFQNIANLGTGIIISLIYGWQLTLLLLAIVPIIAIAGVVEMKMLSGQALKDKKELEGSGKIATEAIENFRTVVSLTREQKFETMYAQSLQIPYRNAMKKAHVFGITFSFTQAMMYFSYAACFRFGAYLVTQQLMTFENVLLVFSAIVFGAMAVGQVSSFAPDYAKATVSASHIIRIIEKTPEIDSYSTQGLKPNMLEGNVQFSGVVFNYPTR--------PSIPVLQGLSLEVKKGQTLALVGSSGCGKSTVVQLLERFYDPMAGSVFLD--G--KEIKQL---NVQWLRAQLGIVSQEPI--LF-DCSIAENIAYGDNSRVVS-----YEEIVRAAKEANIHQFIDSLPDKYNTRVGDKGTQLSGGQKQRIAIARALVRQPHILLLDQATSALDTESEKVVQEALDKAR--EGRTCIVIAHRLSTIQN-ADLIVVIQNGKVKEHGTHQQLLAQK-----------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5KO2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2138 -23736 -11.10 -44.45
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : -11.10
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.374

(partial model without unconserved sides chains):
PDB file : Tito_5KO2.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5KO2-query.scw
PDB file : Tito_Scwrl_5KO2.pdb: