Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSSLSQVNADVLKQAQQRIQQDLLTTLAAFSIPEPLKSAVHHAVMLGGKRVRPALCYATASLQDNPNFAAARRAAVAVELIHCYSLAHDDLPCMDNDLLRRGQPTCHVAFGEDTALLAGDILQSMAFEVLGSRLFDEQGQGTDAAIVLKQIQILATA--SSKMVCGQVLDLQAEAK--QISQDELENIHRNKTGALIQAAIMMGAVTIFPGTDQAIPKLRQYGQAIGLAFQVQDDILDITSSTETLGKTAGKDEQVQKSTYPALMGLEQAQIYAKELHDQAFEALAHFGENAKELVEISQFLLARTN
3M0G Chain:B ((2-287))------SLSERLKEVQDAVETAMAAAIGRL-PAGDLRDAMAYAA-QGGKRLRAFLAIESAAIH-GISMAQAMPAALAVEALHAYSLVHDDMPCMDNDDLRRGLPTVHKKWDDATAVLAGDALQTLAFELCTDPVLG------SAENRVALVAALAQASGAEGMVYGQALDIAAETAAVPLTLDEIIRLQAGKTGALISFAAQAGAIL-AGADR---GPLTAYATALGLAFQIADDILDV------------------KATFVSLLGLAGAKSRAADLVAEAEAALAPYGEAASTLRACARYVIER--


General information:
TITO was launched using:
RESULT:

Template: 3M0G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1345 -130106 -96.73 -492.83
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain B : 0.76

3D Compatibility (PKB) : -96.73
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.588

(partial model without unconserved sides chains):
PDB file : Tito_3M0G.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3M0G-query.scw
PDB file : Tito_Scwrl_3M0G.pdb: