Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKIIVIGQSGSGKSTLARKIKEITDFPLLPLDLLWHTTDYSIQAKKWFLQEQQLFMVSNPSWIVEGNYTSTLEERIKEADKIIWLKVPRYLAIYRVVW-----------RSLKRKINKKS-RPDMPESF-----SEKLNREYLEFLSFIWHFEENNEPKIQQLIQVANARNKLIILKTRREKQEFLTKLKIESKNN
5C78 Chain:D ((376-555))EKIAFIGESGCGKSTLVDLIIGLLKP--KEGQILIDKQELNASNAKNYRQKI-GYIPQ-NIYLFNDSIAKNITFGDAVDEE-KLNKVIKQANLEHFIKNLPQGVQTKVGDGGSNLSGGQKQRIAIARALYLEPEILVLDQAT-------SALDTQSEAKIMDEIYKISKDKTMIIIAHRLSTITQCDKVYRL----


General information:
TITO was launched using:
RESULT:

Template: 5C78.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 658 -1680 -2.55 -10.30
target 2D structure prediction score : 0.46
Monomeric hydrophicity matching model chain D : 0.63

3D Compatibility (PKB) : -2.55
2D Compatibility (Sec. Struct. Predict.) : 0.46
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.055

(partial model without unconserved sides chains):
PDB file : Tito_5C78.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5C78-query.scw
PDB file : Tito_Scwrl_5C78.pdb: