Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKNILFDGLRSVARIGETAVVAAKAGIKYATDKPSNAKLMRETFESLGSTYIKLGQFIASTPSLFPREYVEEFQGCLDQTPTLPFSYIQGVLASEFEGRDLSQIFSYIDETPLASASIAQVHAAKLT-T---GEDVVIKVQKPGVETILYTDLNVVHWAAKLLERAVPKIKFAALSDIVDEIKTRMVREVDFIEEAQNLDDFVEYLNISQNQAATAPKVYHQFS--TRRVLTMQRLYGVPLTDFSVVKQYAKDPSQVLITAMNT--WFGSLMLCKSFHADLHAGNLMLLEDGRVGFIDFGIVGQLKPEVWTACIAFMDALQKTDYQAMAENMLKMGMTHNKIDVQVLAQDLERLFNGVLMADPQQILASNPADLNDIMMDMVAVGERHGIKFPRDFALLFKQMLYFDRFMRILAPYTDIYADQRLKMVQNMEPASLLKH
2R2P Chain:A ((28-222))---------------------------------------------------------------------------------------------------------------RVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEK---------------------------------------QRRDFLGEASIMGQF----DHPN-----IIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDP-AAYTT---RG-KIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVS-----------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2R2P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 814 -24901 -30.59 -134.60
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.55

3D Compatibility (PKB) : -30.59
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.55
QMean score : 0.414

(partial model without unconserved sides chains):
PDB file : Tito_2R2P.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2R2P-query.scw
PDB file : Tito_Scwrl_2R2P.pdb: